| Name | Version | Summary | date |
| celltypeAgent |
1.0.0 |
统一的细胞类型分析工具包，集成四个专业Agent提供完整的细胞类型注释流程 |
2025-10-26 16:10:15 |
| genome-mcp |
0.2.3 |
Genome MCP server - 优化版本：智能基因组数据访问 |
2025-10-26 08:53:13 |
| pg-sui |
1.6.3 |
Python machine and deep learning API to impute missing genotypes |
2025-10-26 00:30:27 |
| ncbi-tree |
1.1.0 |
ncbi-tree is an open source, cross-platform command-line tool for downloading the latest NCBI taxonomy database and converting it to Newick tree format (.tre), with optional plain-text visualization (.txt) |
2025-10-25 18:16:53 |
| ENATool |
2.0.0 |
Comprehensive tool for downloading and managing ENA sequencing data |
2025-10-25 16:06:29 |
| mite-extras |
1.6.5 |
Parsing, conversion, and validation functionality for Minimum Information about a Tailoring Enzyme (MITE) files. |
2025-10-25 15:20:47 |
| mite-schema |
1.8.4 |
Containing the Minimum Information about a Tailoring Enzymes data standard schema and auxiliary methods |
2025-10-25 15:13:21 |
| plantismash |
2.0.4 |
Detection of plant specialized metabolism gene clusters in plants |
2025-10-25 10:56:54 |
| countmut |
0.0.6 |
Ultra-fast strand-aware mutation counter |
2025-10-24 07:27:37 |
| evo2-mcp |
0.2.2 |
MCP server for generating, scoring and embedding genomic sequences using Evo 2 |
2025-10-23 13:49:43 |
| tahoex |
1.0.4 |
Tahoe-x1: Perturbation trained single-cell foundation models with up to 3 billion parameters |
2025-10-23 05:15:58 |
| markdup |
0.0.15 |
Fast, accurate BAM deduplication with intelligent UMI detection and correct fragment detection |
2025-10-21 18:37:44 |
| cogent3 |
2025.9.8a5 |
COmparative GENomics Toolkit 3: genomic sequence analysis within notebooks or on compute systems with 1000s of CPUs. |
2025-10-20 23:32:58 |
| parquetframe |
1.0.1 |
A universal data processing framework with multi-engine support (pandas, Polars, Dask) and multi-format I/O (CSV, JSON, Parquet, ORC, Avro) with intelligent backend selection |
2025-10-19 18:21:30 |
| pyranges1 |
1.1.5 |
GenomicRanges for Python. |
2025-10-19 15:11:33 |
| snippy-nextgen |
1.12.2 |
The Next Generation of Microbial Variant Calling with Snippy |
2025-10-17 04:49:48 |
| insdc-benchmarking-schema |
1.2.0 |
JSON schema and validation for INSDC benchmarking results |
2025-10-16 11:37:57 |
| c2i-athena-mcp |
1.0.3 |
C2i Genomics Athena MCP Server with MRD calculation tools |
2025-10-15 19:10:18 |
| ngs-ai-agent |
1.0.0 |
AI-powered automated NGS analysis pipeline |
2025-10-14 22:40:46 |
| aoutools |
0.1.1 |
A library of tools for analyzing All of Us data. |
2025-10-11 21:12:45 |